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Contact

Quantitative skills

Bayesian statistics, Hierarchical models, Random Forest, Mathematical modelling, Regression

Programming skills

Data analysis:
R, Python, Stan, HPC, QGIS

Data base: SQLite

Automation/reports:
markdown, pandoc, Quarto,
LateX, bash, makefile

Web: HTML/CSS, ShinyApp

DevOps (CI/CD): Git, GitHub, Docker, GitHub Actions

Languages

Portuguese Native
French Full Professional
English Full Professional

Disclaimer

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The source code is available at github.com/willvieira/cv.

Last updated on 2024-12-01.

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Willian Vieira PhD candidate

< + > Quantitative ecologist | I love to automate stuff

Education

PhD. Candidate, Ecology

Integrative Ecology Lab - Université de Sherbrooke, Canada

N/A

Current - 2017

  • Developing demographic models to better understand how trees will face climate change
  • Integral Projection Models | mathematical modeling | Hierachical models | Bayesian statistics | Quantitative thecniques

Masters 2, Agroecology and Resource Management

École Nationale Supérieure des Sciences Agronomiques
de Bordeaux (BSA), Bordeaux, France

N/A

2016 - 2015

  • Thesis: “Modelling the dispersion of weed species in agricultural landscapes”
  • Process-based modelling | R | Sensitivity analysis

BSc in Agronomy

Universidade Federal de Santa Catarina, Florianópolis, Brazil

N/A

2015 - 2010

Consulting Experience

Biostatistician

Environment and Climate Change Canada (ECCC)

N/A

2022 - 2020

  • Boreal Optimal Sampling Strategy for birds monitoring in Quebec
  • Scripting spatial analysis | spatially stratified sampling | R
  • Code: , Report:

Research Experience

Research visiting

National Research Institute for Agriculture, Food and
Environment INRAe - EcoSystèmes et Sociétés En Montagne

Grenoble, France

2018

  • Collaboration on the mathematical formulation
    of how forest management affect forest dynamics
  • Analytical analysis | Modelling | ShinyApp | R package

Mitacs Internship

Ouranos

Montréal, CA

2017

  • Forest dynamic models | Climate change models

Master 2 internship

French National Institute for Agricultural Research
(INRA - UMR 1347 Agroecologie)

Dijon, France

2016

  • Modelling weed dispersion in agricultural landscapes to improve the sustainable management of weeds

Undergraduate Researcher

Group of Research in Tropical forests
(NPFT - Universidade Fedaral de Santa Catarina)

Florianópolis, Brazil

2015 - 2014

  • Characterize the dynamics of tropical forest
  • Data analysis | Statistics | R | data management | field work

Undergraduate Researcher

Laboratory of Plant Developmental Physiology and Genetics
(LFDGV - Universidade Fedaral de Santa Catarina)

Florianópolis, Brazil

2014 - 2012

  • Quantify the genetic diversity of tropical trees
  • Lab work | PCR | microsatellites markers | genotyping

Teaching Experience

Biodiversity Modelling Summer School

Bios\(^2\) summer school

Sherbrooke, CA

2021

  • Teaching assistant and lectured for graduate students
  • Evaluating ecological models using Bayesian statistics

Methods in computational ecology

BIO500 - Départament de biologie, Université de Sherbrooke

Sherbrooke, CA

2020 - 2019

  • Teaching assistant and lectured for undergraduate students
  • Tools for reproducible science | SQL | Git | R | LaTeX | Markdown | Makefile

Software and Data Carpentry workshop

Bios\(^2\) training for graduate students

Online

2020

  • The Unix Shell
  • Data Management with SQL for Ecologists

QCBS R Workshops

Université de Sherbrooke & Université du Québec à Rimouski

Sherbrooke & Rimouski, CA

2019 - 2018

  • Instructor to graduate students
  • Workshops: Introduction to R | Data management | Data Visualization | Control flow | Linear models

Probability and statistics

GCI145 - Faculté de génie, Université de Sherbrooke

Sherbrooke, CA

2019

  • Teaching assistant and lectured for undergraduate students
  • Probability theory | Distribution | Descriptive statistics | Hypothesis testing | Linear models

Soil ecology

Départament de biologie - Université de Sherbrooke

Sherbrooke, CA

2018 - 2017

  • Teaching assistant and lectured for undergraduate students
  • Lab | Covered methods to determine soil texture

Modelisation de la dynamique forestier du Quebec face au changement climatique

Départament de biologie, Université de Sherbrooke

Sherbrooke, CA

2018

  • Guest lecturer in Plant Ecology (Presentation) to undergraduate students
  • Covered modelling approaches in ecology | model construction and applications

Introduction to scientific programming

BIO109 - Départament de biologie, Université de Sherbrooke

Sherbrooke, CA

2018

  • Teaching assistant for undergraduate students
  • Pogramming concepts | Data management | Control flow | R language

Training

Data visualization and biodiversity modelling

Summer school - Bios²

Magog, CA

2022

  • Business intelligence | data user profiles | Conceptualize interactive dashboard | Figma

Mathematical Modelling in Ecology and Evolution

Workshop - Bios²

Remote

2020

  • Developing equations | Finding equilibria | analyzing stability | Maxima

Stage-based demographic models in ecology, evolution and conservation biology

NERC Advanced Training - University of Oxford

Oxford, UK

2019

  • Theory and practice | Matrix population models | Integral Projection Models

Biodiversity Modelling

Summer school - Université de Sherbrooke

Magog, CA

2019

  • Theory and practice on different biodiversity modelling techniques
  • Statistics | Differential equations | Stochastic simulations | Climate change models | uncertainty tracking

Data-driven ecological synthesis

DDES summer school - Université de Montréal

Montréal, CA

2017

  • Good practices in scientific computing
  • Data management | Mathematical tools | Data analysis tools | Parallel computing | Rreproducible science

Bayesian Statistics for Ecologists

Summer school - Université de Sherbrooke

Magog, CA

2017

  • Theory and practice using Stan | Probability theory | Likelihood | MCMC | Hierarchical modelling | Model comparison

Publications

Paying colonization credit with forest management could accelerate the range shift of temperate trees under climate change

Ecological Modelling

N/A

2024

  • Vieira, W., Boulangeat, I., Brice, M., Bradley, R.L., Gravel, D.

Moderate disturbances accelerate forest transition dynamics under climate change in the temperate–boreal ecotone of eastern North America

Global Change Biology

N/A

2020

  • Brice, M.H., Vissault, S., Vieira, W., Gravel, D., Legendre, P., Fortin, M.J.

Genetic and demographic aspects of Varronia curassavica Jacq. in a heterogeneous coastal ecosystem

Anais da Academia Brasileira de Ciências

N/A

2020

  • Hoeltgebaum, M.P., Lauterjung, M.B., Montagna, T., Candido-ribeiro, R., Vieira, W., Bernardi, A.P., Cristofolini, C., Reis, M.S.D.

Selected Talks and Posters

Lab: {STManaged} R package

Biodiversity Modelling summer school

Magog, CA

2020

  • Demonstration of my R package to be used during the intensive course (Presentation)

Using Integral Projection Models to assess how Contemporary Niche Theory predicts trees range limits

British Ecological Society Annual Meeting

Belfast, UK

2019

The effect of forest management on forest distribution under climate change

QCBS annual symposium

Montréal, CA

2018

Can forest management help increase the rate of forest migration northward to follow climate change?

European Geosciences Union General Assembly

Vienna, AT

2017